usefragsph not on
There are 24 ligand heavy atoms
Ligand center of coords (x y z): -6.2165 19.7572916666667 3.082875
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1192
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 607
WARNING: removing a crystallographic sphere that is distance 0.819478492701304 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 598
Number of spheres polar: 235, nonpolar: 187, out of current total: 598
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -14.02127 3.73418 9.81358 29.74473 -6.90761 12.97397
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 240
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 180
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 173
Spheres center of coords (x y z): -3.5812623699422 22.357939132948 1.46068572254335
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.74035858907124
Final number of output spheres is: 45
Number of polar spheres: 26
Number of nonpolar spheres: 10
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 23