There are 12 ligand heavy atoms Ligand center of coords (x y z): 81.6208333333333 75.0015 97.9635 useligsph not on Starting number of spheres from sph/sph cluster 0: 933 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 676 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 672 Number of spheres polar: 347, nonpolar: 199, out of current total: 672 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 69.65856 91.40563 63.15900 86.92801 86.24012 109.91746 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 212 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 154 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 81.6208333333333 75.0015 97.9635 Center point: 114 xyz: 81.62881 75.24179 97.49718 After continuity checking, number of spheres is: 126 Spheres center of coords (x y z): 80.4562884126984 71.5779711904762 100.991868015873 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 81.0560843617238 74.9680995346957 99.6412023062919 Average weighted-distance for final elimination is: 19.9590410083945 Final number of output spheres is: 120 Number of polar spheres: 54 Number of nonpolar spheres: 27 Number of spheres that are near neither polar nor nonpolar receptor atoms: 39 Final number of spheres that are from crystallographic ligand: 0