usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 50.0128888888889 51.7075185185185 34.6142592592593
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1263
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 792
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 786
Number of spheres polar: 315, nonpolar: 274, out of current total: 786
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 40.06241 59.91136 41.73555 61.65881 24.67339 43.38720
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 441
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 352
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 348
Spheres center of coords (x y z): 52.1606564655172 51.5654155172414 33.1543466666667
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.23094360722241
Final number of output spheres is: 60
Number of polar spheres: 28
Number of nonpolar spheres: 10
Number of spheres that are near neither polar nor nonpolar receptor atoms: 22
Final number of spheres that are from crystallographic ligand: 27