usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 48.359 50.5046428571428 34.6631785714286
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1185
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 746
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 746
Number of spheres polar: 268, nonpolar: 312, out of current total: 746
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 38.38813 58.22569 40.87436 60.44342 24.70073 43.25700
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 252
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 204
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 194
Spheres center of coords (x y z): 49.7314454123712 50.947038814433 33.0622546391753
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.77524119905359
Final number of output spheres is: 45
Number of polar spheres: 18
Number of nonpolar spheres: 16
Number of spheres that are near neither polar nor nonpolar receptor atoms: 11
Final number of spheres that are from crystallographic ligand: 28