There are 29 ligand heavy atoms
Ligand center of coords (x y z): 3.08468965517241 0.24048275862069 4.83313793103448
useligsph not on
Starting number of spheres from sph/sph cluster 0: 1077
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 799
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 797
Number of spheres polar: 307, nonpolar: 320, out of current total: 797
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -8.77649 14.95570 -10.49038 12.19580 -7.01049 16.78770
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 276
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 219
No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 3.08468965517241 0.24048275862069 4.83313793103448
Center point: 102 xyz: 3.59723 0.07988 5.63472
After continuity checking, number of spheres is: 197
Spheres center of coords (x y z): 3.11642253807107 -1.05790812182741 6.18424670050762
Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres
Receptor center of coords (x y z): 3.78282966666666 -1.17098916666666 5.50666850000001
Average weighted-distance for final elimination is: 22.352945949794
Final number of output spheres is: 120
Number of polar spheres: 57
Number of nonpolar spheres: 24
Number of spheres that are near neither polar nor nonpolar receptor atoms: 39
Final number of spheres that are from crystallographic ligand: 0