There are 28 ligand heavy atoms Ligand center of coords (x y z): 40.0033214285714 50.3824285714286 36.77 useligsph not on Starting number of spheres from sph/sph cluster 0: 1170 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 916 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 912 Number of spheres polar: 422, nonpolar: 307, out of current total: 912 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 28.01582 52.00002 38.67482 62.37666 24.78462 48.66137 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 294 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 243 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 40.0033214285714 50.3824285714286 36.77 Center point: 210 xyz: 39.66300 50.82373 36.51561 After continuity checking, number of spheres is: 214 Spheres center of coords (x y z): 41.4138461682243 52.347153271028 38.6310295794392 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 40.162401511158 50.8624095940958 37.8543948339484 Average weighted-distance for final elimination is: 23.2366557749832 Final number of output spheres is: 120 Number of polar spheres: 54 Number of nonpolar spheres: 26 Number of spheres that are near neither polar nor nonpolar receptor atoms: 40 Final number of spheres that are from crystallographic ligand: 0