usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): 40.2215217391304 50.9066086956522 35.7050869565217
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1244
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 647
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 643
Number of spheres polar: 252, nonpolar: 219, out of current total: 643
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 30.75817 50.15005 45.33463 60.77796 25.87917 45.69654
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 353
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 311
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 292
Spheres center of coords (x y z): 40.1847114726027 52.4722252739726 38.2524694863014
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.57075779080911
Final number of output spheres is: 60
Number of polar spheres: 34
Number of nonpolar spheres: 12
Number of spheres that are near neither polar nor nonpolar receptor atoms: 14
Final number of spheres that are from crystallographic ligand: 23