usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 41.3968965517241 50.2140689655172 36.7909655172414
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1310
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 810
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 801
Number of spheres polar: 311, nonpolar: 295, out of current total: 801
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 33.15673 51.34038 40.30127 60.21320 26.96737 46.77187
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 436
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 372
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 356
Spheres center of coords (x y z): 41.7351633146068 52.222828735955 38.7431646629213
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.84551495599381
Final number of output spheres is: 60
Number of polar spheres: 30
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 29