usefragsph not on
There are 32 ligand heavy atoms
Ligand center of coords (x y z): 41.16271875 50.913375 35.64525
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1451
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 734
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 732
Number of spheres polar: 281, nonpolar: 254, out of current total: 732
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 32.43332 51.07799 40.91997 60.86000 25.75795 45.64050
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 251
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 205
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 196
Spheres center of coords (x y z): 41.9624940306122 52.6431445408163 38.166385
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.49426957114816
Final number of output spheres is: 45
Number of polar spheres: 20
Number of nonpolar spheres: 13
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 32