usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 62.44884 52.77504 84.52468
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1530
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 757
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 753
Number of spheres polar: 273, nonpolar: 303, out of current total: 753
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 52.45574 72.41326 43.35335 62.66167 74.53259 91.58813
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 394
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 338
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 330
Spheres center of coords (x y z): 63.7350226060606 52.8550407272727 82.4064261515151
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.06563283687474
Final number of output spheres is: 60
Number of polar spheres: 27
Number of nonpolar spheres: 17
Number of spheres that are near neither polar nor nonpolar receptor atoms: 16
Final number of spheres that are from crystallographic ligand: 25