usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): 47.535347826087 50.1946086956522 36.1530434782609
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 954
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 575
WARNING: removing a crystallographic sphere that is distance 0.579762882564933 angstroms from closest receptor atom
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 573
Number of spheres polar: 234, nonpolar: 184, out of current total: 573
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 39.29908 57.11924 42.57261 60.13543 26.16826 46.06643
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 228
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 174
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 163
Spheres center of coords (x y z): 48.966863190184 51.656702208589 33.2398617791411
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.9410459159067
Final number of output spheres is: 45
Number of polar spheres: 21
Number of nonpolar spheres: 11
Number of spheres that are near neither polar nor nonpolar receptor atoms: 13
Final number of spheres that are from crystallographic ligand: 22