There are 31 ligand heavy atoms Ligand center of coords (x y z): 39.5635806451613 49.3529032258064 38.2674838709677 useligsph not on Starting number of spheres from sph/sph cluster 0: 1524 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 1087 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 1066 Number of spheres polar: 491, nonpolar: 331, out of current total: 1066 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 27.87289 51.54721 37.35291 61.19097 26.28526 50.21827 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 379 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 288 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 39.5635806451613 49.3529032258064 38.2674838709677 Center point: 80 xyz: 40.66792 49.61446 37.29609 After continuity checking, number of spheres is: 240 Spheres center of coords (x y z): 41.1045852083333 51.619491625 40.64354125 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 39.4187884648893 50.1052275657781 39.4015147238195 Average weighted-distance for final elimination is: 23.8109776744755 Final number of output spheres is: 120 Number of polar spheres: 49 Number of nonpolar spheres: 31 Number of spheres that are near neither polar nor nonpolar receptor atoms: 40 Final number of spheres that are from crystallographic ligand: 0