There are 14 ligand heavy atoms Ligand center of coords (x y z): 41.6347857142857 1.8065 15.861 useligsph not on Starting number of spheres from sph/sph cluster 0: 777 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 681 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 677 Number of spheres polar: 308, nonpolar: 239, out of current total: 677 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 31.45636 53.61847 -9.34142 13.36005 4.10001 26.68584 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 212 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 163 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 41.6347857142857 1.8065 15.861 Center point: 97 xyz: 41.23794 2.37491 15.39404 After continuity checking, number of spheres is: 143 Spheres center of coords (x y z): 43.7751601398601 -0.581892447552448 16.6717002797203 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 42.2404305150632 0.80607619047619 15.1923836734694 Average weighted-distance for final elimination is: 19.5396877818324 Final number of output spheres is: 120 Number of polar spheres: 51 Number of nonpolar spheres: 28 Number of spheres that are near neither polar nor nonpolar receptor atoms: 41 Final number of spheres that are from crystallographic ligand: 0