usefragsph not on
There are 14 ligand heavy atoms
Ligand center of coords (x y z): 41.6347857142857 1.8065 15.861
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 777
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 615
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 611
Number of spheres polar: 272, nonpolar: 212, out of current total: 611
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 32.09549 51.61640 -8.08395 11.69939 7.44952 25.80994
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 315
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 264
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 255
Spheres center of coords (x y z): 43.0755301568627 -0.416662274509804 16.9496245490196
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.11656637885683
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 18
Number of spheres that are near neither polar nor nonpolar receptor atoms: 17
Final number of spheres that are from crystallographic ligand: 14