usefragsph not on
There are 27 ligand heavy atoms
Ligand center of coords (x y z): 47.1937037037037 51.3318518518519 34.0391111111111
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1384
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 697
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 692
Number of spheres polar: 243, nonpolar: 279, out of current total: 692
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 37.26734 57.12943 42.39429 61.33126 24.05208 41.38190
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 253
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 205
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 191
Spheres center of coords (x y z): 49.0554046073298 52.3855702617801 32.0353984816754
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.76240556810258
Final number of output spheres is: 45
Number of polar spheres: 18
Number of nonpolar spheres: 21
Number of spheres that are near neither polar nor nonpolar receptor atoms: 6
Final number of spheres that are from crystallographic ligand: 27