usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 50.0284642857143 50.0458214285714 35.5214642857143
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1130
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 625
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 622
Number of spheres polar: 223, nonpolar: 225, out of current total: 622
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 40.49768 60.00159 40.15885 60.04168 25.68301 45.36023
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 377
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 311
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 294
Spheres center of coords (x y z): 50.4956312244898 51.1915463605442 33.5929904421769
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.42773955061499
Final number of output spheres is: 60
Number of polar spheres: 30
Number of nonpolar spheres: 16
Number of spheres that are near neither polar nor nonpolar receptor atoms: 14
Final number of spheres that are from crystallographic ligand: 28