usefragsph not on
There are 28 ligand heavy atoms
Ligand center of coords (x y z): 31.2641785714286 14.9466071428571 -0.982892857142857
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1666
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 892
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 892
Number of spheres polar: 171, nonpolar: 574, out of current total: 892
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 21.30766 41.26060 5.16058 24.94375 -10.82355 8.89991
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 284
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 242
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 229
Spheres center of coords (x y z): 33.8947655895197 15.2503077729258 0.0748709606986901
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.86264059756649
Final number of output spheres is: 45
Number of polar spheres: 7
Number of nonpolar spheres: 34
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 28