usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): -0.99628 15.74736 -0.60464
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1396
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 789
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 789
Number of spheres polar: 161, nonpolar: 454, out of current total: 789
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -10.86840 8.97682 5.74789 25.60503 -10.51168 9.15821
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 419
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 367
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 354
Spheres center of coords (x y z): -0.641132937853106 11.2033847740113 -0.172176384180791
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.29094369571668
Final number of output spheres is: 60
Number of polar spheres: 21
Number of nonpolar spheres: 35
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 25