usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): -1.87816 15.29436 -0.64844
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1564
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 912
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 912
Number of spheres polar: 189, nonpolar: 568, out of current total: 912
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -11.87544 8.11063 5.29690 25.00392 -10.62018 9.22252
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 445
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 385
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 367
Spheres center of coords (x y z): -0.673284305177113 10.6855773569482 -0.527966049046321
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.97568508382387
Final number of output spheres is: 60
Number of polar spheres: 12
Number of nonpolar spheres: 44
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 25