usefragsph not on
There are 22 ligand heavy atoms
Ligand center of coords (x y z): 2.75272727272727 -3.27227272727273 5.77931818181818
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1711
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 761
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 761
Number of spheres polar: 154, nonpolar: 478, out of current total: 761
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -6.94593 12.73000 -13.24878 6.32859 -4.16565 15.54712
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 223
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 185
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 169
Spheres center of coords (x y z): 6.69745106508875 -6.78385337278107 3.73818059171598
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.59096947674759
Final number of output spheres is: 45
Number of polar spheres: 15
Number of nonpolar spheres: 29
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 22