usefragsph not on
There are 36 ligand heavy atoms
Ligand center of coords (x y z): 17.543 15.0661388888889 25.765
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1460
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 931
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 931
Number of spheres polar: 242, nonpolar: 481, out of current total: 931
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 7.55538 27.49422 5.27170 24.92701 15.82851 35.72268
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 498
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 438
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 415
Spheres center of coords (x y z): 18.4357388915663 14.1136411807229 24.9750705060241
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.00133097725336
Final number of output spheres is: 60
Number of polar spheres: 25
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 36