usefragsph not on
There are 25 ligand heavy atoms
Ligand center of coords (x y z): 14.24172 5.84284 11.66108
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1527
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 852
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 852
Number of spheres polar: 184, nonpolar: 560, out of current total: 852
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 4.25574 24.22583 -4.15100 15.79901 1.68169 21.65908
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 426
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 361
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 328
Spheres center of coords (x y z): 15.8195322865854 6.89457844512195 7.67705935975609
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.49017507291025
Final number of output spheres is: 60
Number of polar spheres: 13
Number of nonpolar spheres: 46
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 25