There are 20 ligand heavy atoms Ligand center of coords (x y z): 30.60785 -3.82875 1.95765 useligsph not on Starting number of spheres from sph/sph cluster 0: 1283 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 813 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 789 Number of spheres polar: 192, nonpolar: 340, out of current total: 789 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 19.34346 42.52455 -15.71228 6.44306 -10.03409 13.93980 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 306 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 257 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 30.60785 -3.82875 1.95765 Center point: 135 xyz: 31.08570 -3.89978 2.23300 After continuity checking, number of spheres is: 240 Spheres center of coords (x y z): 34.6497555 -7.36504904166667 0.373630125 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 27.2449594272077 1.98051360381862 5.3219952267303 Average weighted-distance for final elimination is: 31.2397237664199 Final number of output spheres is: 120 Number of polar spheres: 39 Number of nonpolar spheres: 47 Number of spheres that are near neither polar nor nonpolar receptor atoms: 34 Final number of spheres that are from crystallographic ligand: 0