Distance from surface specified: 1.80 There are 24 ligand heavy atoms Ligand center of coords (x y z): 15.2435833333333 5.83754166666667 -0.199333333333333 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 14561 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (14 angstroms): 11000 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<2 angstroms): 10556 Number of spheres polar: 5340, nonpolar: 3860, out of current total: 10556 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 1.25580 29.24100 -8.15900 19.83340 -14.19900 13.79900 Number of spheres after removing spheres too close to each other (approximately <1.4 angstroms): 1557 Number of spheres after second pass removing spheres absolutely <0.9 from each other: 820 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 804 Spheres center of coords (x y z): 9.59795422885573 3.5304947761194 -0.398094029850748 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 12.9383340465362 Final number of output spheres is: 200 Number of polar spheres: 101 Number of nonpolar spheres: 89 Number of spheres that are near neither polar nor nonpolar receptor atoms: 10 Final number of spheres that are from crystallographic ligand: 24