usefragsph not on
There are 31 ligand heavy atoms
Ligand center of coords (x y z): -49.7567741935484 -0.0951935483870968 -20.8066774193548
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1807
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 953
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 952
Number of spheres polar: 296, nonpolar: 415, out of current total: 952
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -59.72391 -40.46488 -9.93619 9.90411 -30.74585 -10.84784
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 301
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 245
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 238
Spheres center of coords (x y z): -48.856589789916 -1.20726890756303 -20.3820805042017
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.79202047637329
Final number of output spheres is: 45
Number of polar spheres: 14
Number of nonpolar spheres: 22
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 31