usefragsph not on
There are 23 ligand heavy atoms
Ligand center of coords (x y z): -52.7712173913043 -0.857086956521739 -23.4519130434783
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1718
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 878
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 878
Number of spheres polar: 218, nonpolar: 456, out of current total: 878
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -62.71892 -42.83333 -10.75805 9.13963 -33.23170 -13.45306
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 500
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 424
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 376
Spheres center of coords (x y z): -49.8141475797872 -3.40572742021277 -22.3430491489361
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.70876446337799
Final number of output spheres is: 60
Number of polar spheres: 24
Number of nonpolar spheres: 32
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 23