There are 33 ligand heavy atoms Ligand center of coords (x y z): 16.2921212121212 34.8708181818182 92.035303030303 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 18176 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 9690 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 9690 Number of spheres polar: 5022, nonpolar: 3748, out of current total: 9690 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 4.29320 28.29080 22.88200 46.86240 80.03640 104.01280 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1254 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 525 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 439 Spheres center of coords (x y z): 19.6952109339408 32.5503061503417 89.1639284738041 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 8.3683556151702 Final number of output spheres is: 120 Number of polar spheres: 45 Number of nonpolar spheres: 69 Number of spheres that are near neither polar nor nonpolar receptor atoms: 6 Final number of spheres that are from crystallographic ligand: 33