usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): -7.41775 -4.583 12.6326
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1198
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 476
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 476
Number of spheres polar: 210, nonpolar: 203, out of current total: 476
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -17.04000 2.55148 -14.50240 5.35459 2.63910 22.63062
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 251
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 197
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 150
Spheres center of coords (x y z): -5.26922253333333 -3.34446066666667 15.1711904
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.31510470233789
Final number of output spheres is: 60
Number of polar spheres: 19
Number of nonpolar spheres: 34
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 20