usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): 24.2289 42.3272 11.2408
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1014
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 337
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 337
Number of spheres polar: 163, nonpolar: 142, out of current total: 337
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 14.23124 32.19141 32.37652 52.16532 1.25987 21.22598
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 115
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 87
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 63
Spheres center of coords (x y z): 24.391860952381 41.5563625396826 10.4799863492064
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 2.51461696949188
Final number of output spheres is: 45
Number of polar spheres: 9
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 9
Final number of spheres that are from crystallographic ligand: 20