usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): 20.3211379310345 36.0070344827586 30.9837931034483
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1406
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 551
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 550
Number of spheres polar: 172, nonpolar: 275, out of current total: 550
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 10.32541 30.17056 26.09301 45.98974 22.08008 40.91567
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 198
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 169
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 110
Spheres center of coords (x y z): 19.1722604545455 34.391632 31.8541166363636
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 3.52676752678243
Final number of output spheres is: 45
Number of polar spheres: 10
Number of nonpolar spheres: 31
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 29