usefragsph not on
There are 30 ligand heavy atoms
Ligand center of coords (x y z): 17.7421666666667 35.3751666666667 52.6758333333333
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1519
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 756
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 756
Number of spheres polar: 213, nonpolar: 452, out of current total: 756
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 7.74479 27.64669 25.39237 45.35863 42.68388 62.65107
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 240
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 200
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 151
Spheres center of coords (x y z): 16.8032716556291 33.2454452317881 55.6379079470199
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.31573462757069
Final number of output spheres is: 45
Number of polar spheres: 9
Number of nonpolar spheres: 32
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 30