usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): 47.0734 -14.4916 3.4339
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1217
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 491
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 491
Number of spheres polar: 163, nonpolar: 285, out of current total: 491
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 37.08957 56.99246 -24.25738 -4.54978 -6.55038 13.43135
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 260
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 210
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 157
Spheres center of coords (x y z): 49.6144171974522 -15.766320955414 5.15636770700637
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.11994691908467
Final number of output spheres is: 60
Number of polar spheres: 21
Number of nonpolar spheres: 36
Number of spheres that are near neither polar nor nonpolar receptor atoms: 3
Final number of spheres that are from crystallographic ligand: 20