There are 21 ligand heavy atoms Ligand center of coords (x y z): 4.04819047619048 3.524 -6.23390476190476 useligsph not on Starting number of spheres from sph/sph cluster 0: 1263 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 707 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 706 Number of spheres polar: 307, nonpolar: 345, out of current total: 706 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -7.94224 15.85840 -8.28718 15.45871 -18.19349 5.71705 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 279 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 195 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 4.04819047619048 3.524 -6.23390476190476 Center point: 60 xyz: 4.24396 3.96100 -6.00998 After continuity checking, number of spheres is: 78 Final number of output spheres is: 78 Number of polar spheres: 26 Number of nonpolar spheres: 42 Number of spheres that are near neither polar nor nonpolar receptor atoms: 10 Final number of spheres that are from crystallographic ligand: 0