There are 33 ligand heavy atoms Ligand center of coords (x y z): 31.4058181818182 -1.49060606060606 25.2967878787879 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 18024 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 10254 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 10254 Number of spheres polar: 4748, nonpolar: 4636, out of current total: 10254 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 19.41080 43.40540 -13.48620 10.50900 13.29800 37.29300 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 1617 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 743 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 657 Spheres center of coords (x y z): 34.8687202435312 -4.32898295281583 21.3686563165906 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 10.4703304131086 Final number of output spheres is: 120 Number of polar spheres: 45 Number of nonpolar spheres: 70 Number of spheres that are near neither polar nor nonpolar receptor atoms: 5 Final number of spheres that are from crystallographic ligand: 33