usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): 49.24475 30.94535 76.62095
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1242
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 436
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 432
Number of spheres polar: 155, nonpolar: 224, out of current total: 432
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 39.33921 59.01552 20.96354 40.93880 66.66493 86.56538
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 162
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 130
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 54
Spheres center of coords (x y z): 49.1737094444445 30.8176194444444 76.6837312962963
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 1.84205779770139
Final number of output spheres is: 45
Number of polar spheres: 8
Number of nonpolar spheres: 30
Number of spheres that are near neither polar nor nonpolar receptor atoms: 7
Final number of spheres that are from crystallographic ligand: 20