There are 21 ligand heavy atoms Ligand center of coords (x y z): 29.6273333333333 35.957 38.5826666666667 useligsph not on Starting number of spheres from sph/sph cluster 0: 1245 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 757 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 757 Number of spheres polar: 259, nonpolar: 439, out of current total: 757 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 17.64565 41.62686 23.96129 47.85175 26.59652 50.57956 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 303 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 218 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 29.6273333333333 35.957 38.5826666666667 Center point: 56 xyz: 29.95097 35.95457 38.45460 After continuity checking, number of spheres is: 55 Final number of output spheres is: 55 Number of polar spheres: 10 Number of nonpolar spheres: 41 Number of spheres that are near neither polar nor nonpolar receptor atoms: 4 Final number of spheres that are from crystallographic ligand: 0