There are 20 ligand heavy atoms Ligand center of coords (x y z): 29.42755 36.3496 38.4278 useligsph not on Starting number of spheres from sph/sph cluster 0: 1469 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 935 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 932 Number of spheres polar: 356, nonpolar: 496, out of current total: 932 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 17.43568 41.40388 25.39459 48.31934 26.45301 50.41612 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 351 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 233 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 29.42755 36.3496 38.4278 Center point: 60 xyz: 29.11848 36.00518 38.64382 After continuity checking, number of spheres is: 56 Final number of output spheres is: 56 Number of polar spheres: 8 Number of nonpolar spheres: 44 Number of spheres that are near neither polar nor nonpolar receptor atoms: 4 Final number of spheres that are from crystallographic ligand: 0