usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): 29.54725 36.72845 38.6099
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1343
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 381
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 381
Number of spheres polar: 130, nonpolar: 226, out of current total: 381
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 19.56923 39.50402 27.43287 46.70604 28.61057 48.59868
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 200
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 176
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 85
Spheres center of coords (x y z): 29.5586051764706 36.4574370588236 39.0222728235294
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 1.83571508364573
Final number of output spheres is: 60
Number of polar spheres: 11
Number of nonpolar spheres: 48
Number of spheres that are near neither polar nor nonpolar receptor atoms: 1
Final number of spheres that are from crystallographic ligand: 20