There are 20 ligand heavy atoms Ligand center of coords (x y z): 29.82945 36.2715 39.0085 useligsph not on Starting number of spheres from sph/sph cluster 0: 1402 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 843 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 843 Number of spheres polar: 299, nonpolar: 468, out of current total: 843 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 17.87543 41.82455 24.41729 48.27025 27.01000 51.00166 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 360 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 254 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): 29.82945 36.2715 39.0085 Center point: 108 xyz: 29.69485 36.22108 38.90989 After continuity checking, number of spheres is: 56 Final number of output spheres is: 56 Number of polar spheres: 10 Number of nonpolar spheres: 41 Number of spheres that are near neither polar nor nonpolar receptor atoms: 5 Final number of spheres that are from crystallographic ligand: 0