usefragsph not on
There are 19 ligand heavy atoms
Ligand center of coords (x y z): 29.5301578947368 36.1945263157895 38.7666315789474
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1531
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 490
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 490
Number of spheres polar: 180, nonpolar: 279, out of current total: 490
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 19.55566 39.49538 26.23534 46.18328 28.78104 48.72948
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 260
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 216
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 85
Spheres center of coords (x y z): 29.338745882353 36.3441828235294 38.7344510588235
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 1.96188250460466
Final number of output spheres is: 60
Number of polar spheres: 10
Number of nonpolar spheres: 42
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 19