Distance from surface specified: 1.80 There are 29 ligand heavy atoms Ligand center of coords (x y z): 94.7092068965517 20.7092413793103 -4.08741379310345 Using crystallographic ligand as spheres for output Starting number of spheres from sph/sph cluster 0: 16372 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (14 angstroms): 13612 WARNING: removing a crystallographic sphere that is distance 1.77590371360611 angstroms from closest receptor atom Number of spheres after removing too far (>7 angstroms) and too close to receptor (<2 angstroms): 13362 Number of spheres polar: 5950, nonpolar: 6090, out of current total: 13362 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: 80.71000 107.86700 6.71460 34.70440 -18.08100 9.91100 Number of spheres after removing spheres too close to each other (approximately <1.4 angstroms): 1723 Number of spheres after second pass removing spheres absolutely <0.9 from each other: 1006 Crystallographic spheres are present, so doing continuity based on crystallographic spheres After continuity checking, number of spheres is: 978 Spheres center of coords (x y z): 97.6230071574641 19.3998574642127 -3.21310000000001 Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8) Average weighted-distance for final elimination is: 12.8402816334397 Final number of output spheres is: 200 Number of polar spheres: 89 Number of nonpolar spheres: 110 Number of spheres that are near neither polar nor nonpolar receptor atoms: 1 Final number of spheres that are from crystallographic ligand: 28