usefragsph not on
There are 20 ligand heavy atoms
Ligand center of coords (x y z): -11.47745 36.49965 11.9113
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1233
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 305
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 305
Number of spheres polar: 54, nonpolar: 209, out of current total: 305
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -16.59194 -1.49095 26.82402 46.47855 2.02204 21.86140
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 170
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 152
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 101
Spheres center of coords (x y z): -11.2781303960396 36.4418662376238 12.0813145544554
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 1.95244981103753
Final number of output spheres is: 60
Number of polar spheres: 11
Number of nonpolar spheres: 37
Number of spheres that are near neither polar nor nonpolar receptor atoms: 12
Final number of spheres that are from crystallographic ligand: 20