usefragsph not on
There are 38 ligand heavy atoms
Ligand center of coords (x y z): 5.85689473684211 21.1745526315789 7.20413157894737
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1096
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 667
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 667
Number of spheres polar: 171, nonpolar: 330, out of current total: 667
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -4.05840 15.82959 11.46300 31.00999 -2.77694 17.13096
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 363
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 313
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 291
Spheres center of coords (x y z): 6.2775158419244 19.8773468041237 6.63391704467354
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.82701729549123
Final number of output spheres is: 60
Number of polar spheres: 16
Number of nonpolar spheres: 23
Number of spheres that are near neither polar nor nonpolar receptor atoms: 21
Final number of spheres that are from crystallographic ligand: 38