usefragsph not on
There are 37 ligand heavy atoms
Ligand center of coords (x y z): 4.95359459459459 21.9722432432432 7.53378378378378
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1282
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 820
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 820
Number of spheres polar: 205, nonpolar: 437, out of current total: 820
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -4.97296 14.81500 11.97641 31.78832 -2.42929 17.33392
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 259
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 208
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 179
Spheres center of coords (x y z): 5.57816374301676 19.7865223463687 6.54338223463687
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.4109646961478
Final number of output spheres is: 45
Number of polar spheres: 11
Number of nonpolar spheres: 26
Number of spheres that are near neither polar nor nonpolar receptor atoms: 8
Final number of spheres that are from crystallographic ligand: 37