usefragsph not on
There are 32 ligand heavy atoms
Ligand center of coords (x y z): 4.97734375 21.65159375 7.67534375
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1318
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 814
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 813
Number of spheres polar: 256, nonpolar: 360, out of current total: 813
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -4.98996 14.96068 11.65654 31.51081 -2.26810 15.40241
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 405
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 361
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 345
Spheres center of coords (x y z): 4.72970069565217 20.0429026956522 6.58602626086956
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.43682410205194
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 27
Number of spheres that are near neither polar nor nonpolar receptor atoms: 16
Final number of spheres that are from crystallographic ligand: 32