usefragsph not on
There are 31 ligand heavy atoms
Ligand center of coords (x y z): 4.79970967741935 21.6621290322581 8.05574193548387
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1175
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 721
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 719
Number of spheres polar: 225, nonpolar: 326, out of current total: 719
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -5.08480 14.61723 11.68365 31.62046 -1.89672 18.05410
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 400
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 349
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 307
Spheres center of coords (x y z): 5.5740971009772 21.0777511074919 6.37611081433225
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 5.04571408763667
Final number of output spheres is: 60
Number of polar spheres: 14
Number of nonpolar spheres: 26
Number of spheres that are near neither polar nor nonpolar receptor atoms: 20
Final number of spheres that are from crystallographic ligand: 31