usefragsph not on
There are 42 ligand heavy atoms
Ligand center of coords (x y z): 6.26533333333333 21.6048333333333 6.96952380952381
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1231
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 771
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 769
Number of spheres polar: 235, nonpolar: 352, out of current total: 769
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -3.70068 16.12803 11.63900 31.59405 -2.98566 16.41496
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 395
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 345
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 312
Spheres center of coords (x y z): 5.98291942307692 19.5049708653846 7.13457375
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.4364147690993
Final number of output spheres is: 60
Number of polar spheres: 9
Number of nonpolar spheres: 24
Number of spheres that are near neither polar nor nonpolar receptor atoms: 27
Final number of spheres that are from crystallographic ligand: 42