usefragsph not on
There are 34 ligand heavy atoms
Ligand center of coords (x y z): 7.56417647058824 5.496 21.8448235294118
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1138
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 700
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 698
Number of spheres polar: 212, nonpolar: 301, out of current total: 698
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -2.37474 17.41118 -4.48081 15.48655 12.00685 31.70409
Number of spheres after removing spheres too close to each other (approximately <1.0 angstroms): 372
Number of spheres after second pass removing spheres absolutely <0.5 from each other: 331
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 305
Spheres center of coords (x y z): 5.43465544262295 4.77581908196721 21.1890209180328
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 4.99561162034453
Final number of output spheres is: 60
Number of polar spheres: 17
Number of nonpolar spheres: 39
Number of spheres that are near neither polar nor nonpolar receptor atoms: 4
Final number of spheres that are from crystallographic ligand: 34