There are 29 ligand heavy atoms Ligand center of coords (x y z): -7.04806896551724 3.739 16.9455862068966 useligsph not on Starting number of spheres from sph/sph cluster 0: 1158 FINISHED READING IN FILE sph/sph CLUSTER 0 Number of sphere points after cutting off spheres too far from center of ligand (12 angstroms): 955 Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 948 Number of spheres polar: 391, nonpolar: 346, out of current total: 948 Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -18.81928 4.89214 -8.02362 15.68619 4.96638 28.69075 Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 341 Number of spheres after second pass removing spheres absolutely <0.8 from each other: 260 No crystallographic spheres present, so determining sphere nearest center of ligand (x y z): -7.04806896551724 3.739 16.9455862068966 Center point: 225 xyz: -7.69186 3.42522 17.29197 After continuity checking, number of spheres is: 230 Spheres center of coords (x y z): -10.1486088695652 4.17710173913043 16.0756590869565 Not crystallographic ligand, so keeping spheres closest to center of receptor, center of ligand, and center of spheres Receptor center of coords (x y z): 3.87155674518201 5.93900892219842 11.8179753747323 Average weighted-distance for final elimination is: 35.9629694619293 Final number of output spheres is: 120 Number of polar spheres: 49 Number of nonpolar spheres: 30 Number of spheres that are near neither polar nor nonpolar receptor atoms: 41 Final number of spheres that are from crystallographic ligand: 0