usefragsph not on
There are 29 ligand heavy atoms
Ligand center of coords (x y z): -7.04806896551724 3.739 16.9455862068966
Using crystallographic ligand as spheres for output
Starting number of spheres from sph/sph cluster 0: 1158
FINISHED READING IN FILE sph/sph CLUSTER 0 
Number of sphere points after cutting off spheres too far from center of ligand (10 angstroms): 769
Number of spheres after removing too far (>7 angstroms) and too close to receptor (<1.2 angstroms): 764
Number of spheres polar: 289, nonpolar: 292, out of current total: 764
Extents of grid to search are X1 X2 Y1 Y2 Z1 Z2: -17.00841 2.84263 -6.19553 13.70192 7.01801 26.90971
Number of spheres after removing spheres too close to each other (approximately <1.5 angstroms): 262
Number of spheres after second pass removing spheres absolutely <0.8 from each other: 209
Crystallographic spheres are present, so doing continuity based on crystallographic spheres
After continuity checking, number of spheres is: 189
Spheres center of coords (x y z): -9.17789386243386 4.91422349206349 16.7982114814815
Crystallographic ligand, so keeping spheres closest to ANY ligand atom, center of ligand (1/8), and center of spheres (1/8)
Average weighted-distance for final elimination is: 6.17433763998114
Final number of output spheres is: 45
Number of polar spheres: 15
Number of nonpolar spheres: 19
Number of spheres that are near neither polar nor nonpolar receptor atoms: 11
Final number of spheres that are from crystallographic ligand: 29